bedtools MaskFastaBed: use intervals to mask sequences from a FASTA file

Metadata

Links

• bio.tools: BEDTools

EDAM Operations

• Mapping

EDAM Topics

• Genomics

Observed Tool Versions

Within GTN tutorials

2.31.1

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• Galaxy@AuBi
• Galaxy@Pasteur
• MISSISSIPPI
• UseGalaxy.be
• UseGalaxy.cz

2.30.0

• UseGalaxy.eu ⭐️
• UseGalaxy.fr ⭐️
• UseGalaxy.org (Main) ⭐️
• UseGalaxy.org.au ⭐️
• GalaxyTrakr
• MISSISSIPPI
• UseGalaxy.be
• UseGalaxy.cz
• UseGalaxy.no

Relevant Tutorials

• Genome Annotation / Masking repeats with RepeatMasker
• Microbiome / MGnify v5.0 Amplicon Pipeline