Samtools view: - reformat, filter, or subsample SAM, BAM or CRAM
toolshed.g2.bx.psu.edu/repos/iuc/samtools_view/samtools_view/1.9+galaxy31.9+galaxy3
Metadata
Servers Offering this Tool
UseGalaxy.eu (1.9+galaxy3)This is a guess, we are not currently checking if that is actually present.
Observed Tool Versions
Within GTN tutorials
- 1.9+galaxy3
- 1.9+galaxy2
- 1.9+galaxy1
- 1.15.1+galaxy2
- 1.15.1+galaxy0
- 1.13+galaxy2
EDAM Operations
- operation_1812
- operation_3802
- operation_0337
- operation_3096
- operation_3695
- operation_0335
- operation_0227
EDAM Topics
Relevant Tutorials
- Assembly / Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
- Evolution / Identifying tuberculosis transmission links: from SNPs to transmission clusters
- Introduction to Galaxy Analyses / NGS data logistics
- Transcriptomics / Reference-based RNA-Seq data analysis
- Variant Analysis / Avian influenza viral strain analysis from gene segment sequencing data
- Variant Analysis / Exome sequencing data analysis for diagnosing a genetic disease
- Variant Analysis / Pox virus genome analysis from tiled-amplicon sequencing data
- Variant Analysis / Somatic Variant Discovery from WES Data Using Control-FREEC