Workflows
These workflows are associated with Deep Learning (Part 2) - Recurrent neural networks (RNN)
To use these workflows in Galaxy you can either click the links to download the workflows, or you can right-click and copy the link to the workflow which can be used in the Galaxy form to import workflows.
Intro_To_RNN_v1_0_10_0
Kaivan Kamali
Last updated Feb 1, 2024
Launch in Tutorial Mode
License:
CC-BY-4.0
Tests: ✅
Results: Not yet automated
flowchart TD 0["ℹ️ Input Dataset\nX_test"]; style 0 stroke:#2c3143,stroke-width:4px; 1["ℹ️ Input Dataset\nX_train"]; style 1 stroke:#2c3143,stroke-width:4px; 2["ℹ️ Input Dataset\ny_test"]; style 2 stroke:#2c3143,stroke-width:4px; 3["ℹ️ Input Dataset\ny_train"]; style 3 stroke:#2c3143,stroke-width:4px; 4["Create a deep learning model architecture"]; 5["Create deep learning model"]; 4 -->|outfile| 5; 6["Deep learning training and evaluation"]; 5 -->|outfile| 6; 1 -->|output| 6; 3 -->|output| 6; 7["Model Prediction"]; 6 -->|outfile_object| 7; 0 -->|output| 7; 8["Machine Learning Visualization Extension"]; 7 -->|outfile_predict| 8; 2 -->|output| 8;
Importing into Galaxy
Below are the instructions for importing these workflows directly into your Galaxy server of choice to start using them!Hands-on: Importing a workflow
- Click on Workflow on the top menu bar of Galaxy. You will see a list of all your workflows.
- Click on galaxy-upload Import at the top-right of the screen
- Provide your workflow
- Option 1: Paste the URL of the workflow into the box labelled “Archived Workflow URL”
- Option 2: Upload the workflow file in the box labelled “Archived Workflow File”
- Click the Import workflow button
Below is a short video demonstrating how to import a workflow from GitHub using this procedure: