HISAT2: A fast and sensitive alignment program

toolshed.g2.bx.psu.edu/repos/iuc/hisat2/hisat2/2.2.1+galaxy12.2.1+galaxy1

Metadata

Servers Offering this Tool

UseGalaxy.eu (2.2.1+galaxy1)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

2.2.1+galaxy1
2.2.1+galaxy0
2.1.0+galaxy5
2.1.0+galaxy3
2.0.3

EDAM Operations

operation_0292

EDAM Topics

topic_3170

Relevant Tutorials

Proteomics / Proteogenomics 1: Database Creation
Transcriptomics / De novo transcriptome reconstruction with RNA-Seq
Transcriptomics / Pathway analysis with the MINERVA Platform
Transcriptomics / 1: RNA-Seq reads to counts
Transcriptomics / Differential abundance testing of small RNAs