Morgan Howells

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Single Cell

Tutorials

• Single Cell / Converting NCBI Data to the AnnData Format ✍️ 🧐
• Single Cell / Converting between common single cell data formats ✍️
• Single Cell / Filter, plot and explore single-cell RNA-seq data with Scanpy (Python) ✍️

Slides

• Single Cell / Automated Cell Annotation ✍️
• Single Cell / Single-cell Formats and Resources ✍️ 🧐

FAQs

• Importing data from Sierra LIMS
• Notebook-based tutorials can give different outputs

Video Recordings

• Single Cell / Single-cell Formats and Resources 💬 🗣
• Single Cell / Importing files from public atlases 🗣
• Single Cell / Converting NCBI Data to the AnnData Format 🗣
• Single Cell / Filter, plot and explore single-cell RNA-seq data with Scanpy (Python) 💬 🗣

Events

• 2024 Bioinformatics Bootcamp - The Open University 🧑‍🏫

GitHub Activity

github Issues Reported

10 Merged Pull Requests

See all of the github Pull Requests and github Commits by Morgan Howells.

• Update tools for "NCBI to AnnData" tutorial
  single-cell
  spoc-cofest
• New single-cell formats and sources slide deck
  single-cell
• Fix rendering issue in Filter Plot and Explore (Python) tutorial
  single-cell
• New NCBI to AnnData tutorial
  template-and-tools
  single-cell
• New Automated Cell Annotation Slide Deck
  single-cell

Reviewed 2 PRs

We love our community reviewing each other's work!

• New single-cell formats and sources slide deck
  single-cell
• New NCBI to AnnData tutorial
  template-and-tools
  single-cell

News

External Links

Favourite Topics

Favourite Formats