Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoAnna Syme avatar Anna Symeorcid logoTristan Reynolds avatar Tristan ReynoldsAlaa Elghamry avatar Alaa Elghamryorcid logoAnup Kumar avatar Anup Kumarorcid logoMatthias Bernt avatar Matthias Berntorcid logoDaniel Blankenberg avatar Daniel BlankenbergOlha Nahorna avatar Olha Nahornaorcid logoHelena Rasche avatar Helena Rascheorcid logoNadia Goué avatar Nadia Gouéorcid logoArmin Dadras avatar Armin DadrasJoachim Wolff avatar Joachim Wolfforcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanMehmet Tekman avatar Mehmet Tekmanorcid logoDave Clements avatar Dave ClementsDilmurat Yusuf avatar Dilmurat Yusuforcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoDeepti Varshney avatar Deepti VarshneySarah Peter avatar Sarah PeterWilliam Durand avatar William Durandorcid logoBjörn Grüning avatar Björn Grüningorcid logoNicola Soranzo avatar Nicola SoranzoNiall Beard avatar Niall Beardorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoMelanie Föll avatar Melanie FöllAnton Nekrutenko avatar Anton NekrutenkoMirela Minkova avatar Mirela Minkovaorcid logoDaniela Schneider avatar Daniela SchneiderGareth Price avatar Gareth Priceorcid logoMaria Doyle avatar Maria Doyleorcid logoRenato Alves avatar Renato AlvesCyril Monjeaud avatar Cyril Monjeaudorcid logoAlex Ostrovsky avatar Alex OstrovskyScott Cain avatar Scott Cainorcid logoWendi Bacon avatar Wendi Baconorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoFlorian Heyl avatar Florian Heylorcid logoJohn Davis avatar John DavisDavid López avatar David Lópezorcid logoMartin Čech avatar Martin Čechorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoTeresa Müller avatar Teresa Müllerorcid logoMorgan Howells avatar Morgan Howellsorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoPhil Reed avatar Phil Reedorcid logoBérénice Batut avatar Bérénice BatutGoodnews Sandy avatar Goodnews Sandyorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoNate Coraor avatar Nate Coraororcid logoMarius van den Beek avatar Marius van den Beekorcid logoAnthony Bretaudeau avatar Anthony BretaudeauChristopher Barnett avatar Christopher BarnettAndrea Bagnacani avatar Andrea BagnacaniDonny Vrins avatar Donny Vrinsorcid logoLucille Delisle avatar Lucille DelisleYongbin Li avatar Yongbin Liorcid logoClemens Blank avatar Clemens Blankorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoRand Zoabi avatar Rand ZoabiMélanie Pétéra avatar Mélanie PétéraMichele Maroni avatar Michele Maroniorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoGildas Le Corguillé avatar Gildas Le CorguilléSebastian Schaaf avatar Sebastian SchaafAnne Pajon avatar Anne Pajonorcid logoMarisa Loach avatar Marisa Loach

Funding

These individuals or organisations provided funding support for the development of this resource