Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoAnthony Bretaudeau avatar Anthony BretaudeauMichele Maroni avatar Michele Maroniorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoAnna Syme avatar Anna SymeAlaa Elghamry avatar Alaa Elghamryorcid logoFlorian Heyl avatar Florian Heylorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoMorgan Howells avatar Morgan Howellsorcid logoPeter van Heusden avatar Peter van HeusdenMehmet Tekman avatar Mehmet Tekmanorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoMarisa Loach avatar Marisa Loachorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoJohn Davis avatar John DavisYongbin Li avatar Yongbin Liorcid logoClemens Blank avatar Clemens Blankorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonAndrea Bagnacani avatar Andrea Bagnacaniorcid logoHelena Rasche avatar Helena Rascheorcid logoTeresa Müller avatar Teresa MüllerGildas Le Corguillé avatar Gildas Le CorguilléGoodnews Sandy avatar Goodnews Sandyorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanGareth Price avatar Gareth PriceNiall Beard avatar Niall BeardDavid López avatar David LópezCyril Monjeaud avatar Cyril Monjeaudorcid logoMaria Doyle avatar Maria Doyleorcid logoSaskia Hiltemann avatar Saskia HiltemannMirela Minkova avatar Mirela MinkovaOlha Nahorna avatar Olha Nahornaorcid logoMelanie Föll avatar Melanie Föllorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoDaniel Blankenberg avatar Daniel BlankenbergMatthias Bernt avatar Matthias BerntMarius van den Beek avatar Marius van den Beekorcid logoNate Coraor avatar Nate Coraororcid logoDeepti Varshney avatar Deepti Varshneyorcid logoArmin Dadras avatar Armin Dadrasorcid logoNadia Goué avatar Nadia Gouéorcid logoBérénice Batut avatar Bérénice Batutorcid logoCristóbal Gallardo avatar Cristóbal GallardoDonny Vrins avatar Donny Vrinsorcid logoWendi Bacon avatar Wendi BaconMélanie Petera avatar Mélanie PeteraJoachim Wolff avatar Joachim Wolfforcid logoRenato Alves avatar Renato Alvesorcid logoBjörn Grüning avatar Björn GrüningDilmurat Yusuf avatar Dilmurat Yusuforcid logoPhil Reed avatar Phil ReedWilliam Durand avatar William DurandChristopher Barnett avatar Christopher Barnettorcid logoMartin Čech avatar Martin Čechorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoLucille Delisle avatar Lucille Delisleorcid logoDave Clements avatar Dave Clementsorcid logoAlex Ostrovsky avatar Alex OstrovskyAnton Nekrutenko avatar Anton NekrutenkoScott Cain avatar Scott CainSebastian Schaaf avatar Sebastian Schaaforcid logoBert Droesbeke avatar Bert DroesbekeSarah Peter avatar Sarah PeterAnne Pajon avatar Anne Pajon

Funding

These individuals or organisations provided funding support for the development of this resource