Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Niall Beard avatar Niall BeardAndrea Bagnacani avatar Andrea Bagnacaniorcid logoAnna Syme avatar Anna Symeorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-JacksonGareth Price avatar Gareth Priceorcid logoDave Clements avatar Dave Clementsorcid logoCristóbal Gallardo avatar Cristóbal GallardoCyril Monjeaud avatar Cyril MonjeaudMichele Maroni avatar Michele Maroniorcid logoArmin Dadras avatar Armin DadrasMélanie Pétéra avatar Mélanie Pétéraorcid logoBert Droesbeke avatar Bert DroesbekeGoodnews Sandy avatar Goodnews SandyGildas Le Corguillé avatar Gildas Le Corguilléorcid logoTeresa Müller avatar Teresa MüllerScott Cain avatar Scott Cainorcid logoNicola Soranzo avatar Nicola SoranzoDonny Vrins avatar Donny Vrinsorcid logoNadia Goué avatar Nadia Gouéorcid logoClemens Blank avatar Clemens Blankorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoSebastian Schaaf avatar Sebastian Schaaforcid logoMaria Doyle avatar Maria Doyleorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoAlex Ostrovsky avatar Alex OstrovskyMehmet Tekman avatar Mehmet Tekmanorcid logoAnne Fouilloux avatar Anne FouillouxAlaa Elghamry avatar Alaa Elghamryorcid logoMorgan Howells avatar Morgan Howellsorcid logoMarisa Loach avatar Marisa Loachorcid logoSaskia Hiltemann avatar Saskia HiltemannAnton Nekrutenko avatar Anton Nekrutenkoorcid logoMelanie Föll avatar Melanie FöllAnne Pajon avatar Anne PajonMirela Minkova avatar Mirela MinkovaDavid López avatar David Lópezorcid logoLucille Delisle avatar Lucille Delisleorcid logoNate Coraor avatar Nate Coraororcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoMartin Čech avatar Martin Čechorcid logoWendi Bacon avatar Wendi Baconorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoFlorian Heyl avatar Florian Heylorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoRand Zoabi avatar Rand ZoabiChristopher Barnett avatar Christopher Barnettorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoYvan Le Bras avatar Yvan Le BrasYongbin Li avatar Yongbin Liorcid logoPhil Reed avatar Phil ReedOlha Nahorna avatar Olha Nahornaorcid logoMarius van den Beek avatar Marius van den Beekorcid logoBjörn Grüning avatar Björn GrüningWilliam Durand avatar William Durandorcid logoHelena Rasche avatar Helena Rascheorcid logoMatthias Bernt avatar Matthias Berntorcid logoAnup Kumar avatar Anup Kumarorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoJohn Davis avatar John DavisDilmurat Yusuf avatar Dilmurat YusufSarah Peter avatar Sarah PeterJoachim Wolff avatar Joachim Wolfforcid logoBérénice Batut avatar Bérénice Batutorcid logoRenato Alves avatar Renato Alves

Funding

These individuals or organisations provided funding support for the development of this resource