Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

Mehmet Tekman avatar Mehmet Tekmanorcid logoArmin Dadras avatar Armin Dadrasorcid logoMelanie Föll avatar Melanie Föllorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoYvan Le Bras avatar Yvan Le BrasYongbin Li avatar Yongbin LiWilliam Durand avatar William Durandorcid logoPhil Reed avatar Phil Reedorcid logoBérénice Batut avatar Bérénice BatutMichele Maroni avatar Michele Maroniorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoAlex Ostrovsky avatar Alex OstrovskySebastian Schaaf avatar Sebastian Schaaforcid logoNicola Soranzo avatar Nicola SoranzoDilmurat Yusuf avatar Dilmurat Yusuforcid logoFlorian Heyl avatar Florian HeylJoachim Wolff avatar Joachim Wolfforcid logoMorgan Howells avatar Morgan Howellsorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoClemens Blank avatar Clemens Blankorcid logoRenato Alves avatar Renato AlvesMirela Minkova avatar Mirela MinkovaDonny Vrins avatar Donny VrinsChristopher Barnett avatar Christopher Barnettorcid logoMarisa Loach avatar Marisa Loachorcid logoAnup Kumar avatar Anup Kumarorcid logoHans-Rudolf Hotz avatar Hans-Rudolf HotzSarah Peter avatar Sarah Peterorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoMatthias Bernt avatar Matthias Berntorcid logoMarius van den Beek avatar Marius van den Beekorcid logoMaria Doyle avatar Maria Doyleorcid logoAhmed Hamid Awan avatar Ahmed Hamid AwanNiall Beard avatar Niall BeardAndrea Bagnacani avatar Andrea Bagnacaniorcid logoAnna Syme avatar Anna Symeorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoRand Zoabi avatar Rand Zoabiorcid logoNadia Goué avatar Nadia Gouéorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoLucille Delisle avatar Lucille DelisleDavid López avatar David Lópezorcid logoBjörn Grüning avatar Björn Grüningorcid logoNate Coraor avatar Nate Coraororcid logoTeresa Müller avatar Teresa MüllerOlha Nahorna avatar Olha Nahornaorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoDave Clements avatar Dave Clementsorcid logoDaniel Blankenberg avatar Daniel BlankenbergGareth Price avatar Gareth Priceorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMartin Čech avatar Martin Čechorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoHelena Rasche avatar Helena Rascheorcid logoJohn Davis avatar John DavisAnton Nekrutenko avatar Anton NekrutenkoAnne Pajon avatar Anne PajonAlaa Elghamry avatar Alaa ElghamryMélanie Pétéra avatar Mélanie Pétéraorcid logoWendi Bacon avatar Wendi BaconScott Cain avatar Scott Cainorcid logoWolfgang Maier avatar Wolfgang MaierCyril Monjeaud avatar Cyril MonjeaudGoodnews Sandy avatar Goodnews SandyGildas Le Corguillé avatar Gildas Le Corguillé

Funding

These individuals or organisations provided funding support for the development of this resource