Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates rss-feed with our RSS Feed

Community Resources

Community Home Maintainer Home

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

orcid logoMarius van den Beek avatar Marius van den Beekorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoAnna Syme avatar Anna SymeGildas Le Corguillé avatar Gildas Le Corguilléorcid logoArmin Dadras avatar Armin DadrasDavid López avatar David LópezSarah Peter avatar Sarah PeterAnton Nekrutenko avatar Anton Nekrutenkoorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoNadia Goué avatar Nadia Gouéorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoYvan Le Bras avatar Yvan Le BrasYongbin Li avatar Yongbin Liorcid logoFlorian Heyl avatar Florian Heylorcid logoMelanie Föll avatar Melanie Föllorcid logoMartin Čech avatar Martin Čechorcid logoTeresa Müller avatar Teresa Müllerorcid logoLucille Delisle avatar Lucille Delisleorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoDave Clements avatar Dave ClementsMichele Maroni avatar Michele MaroniGoodnews Sandy avatar Goodnews Sandyorcid logoClemens Blank avatar Clemens Blankorcid logoAnne Fouilloux avatar Anne Fouillouxorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoRand Zoabi avatar Rand ZoabiScott Cain avatar Scott Cainorcid logoWendi Bacon avatar Wendi BaconAndrea Bagnacani avatar Andrea BagnacaniDilmurat Yusuf avatar Dilmurat YusufNiall Beard avatar Niall BeardAlaa Elghamry avatar Alaa Elghamryorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoSaskia Hiltemann avatar Saskia HiltemannDonny Vrins avatar Donny Vrinsorcid logoMorgan Howells avatar Morgan Howellsorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoRenato Alves avatar Renato AlvesSebastian Schaaf avatar Sebastian Schaaforcid logoPeter van Heusden avatar Peter van Heusdenorcid logoMatthias Bernt avatar Matthias BerntChristopher Barnett avatar Christopher Barnettorcid logoPhil Reed avatar Phil ReedMehmet Tekman avatar Mehmet Tekmanorcid logoMaria Doyle avatar Maria Doyleorcid logoDeepti Varshney avatar Deepti VarshneyAnne Pajon avatar Anne Pajonorcid logoHelena Rasche avatar Helena Rascheorcid logoAnup Kumar avatar Anup KumarMirela Minkova avatar Mirela MinkovaGareth Price avatar Gareth PriceCyril Monjeaud avatar Cyril MonjeaudOlha Nahorna avatar Olha NahornaMélanie Petera avatar Mélanie PeteraJoachim Wolff avatar Joachim WolffWilliam Durand avatar William Durandorcid logoJohn Davis avatar John Davisorcid logoNate Coraor avatar Nate Coraororcid logoMarisa Loach avatar Marisa Loachorcid logoBérénice Batut avatar Bérénice Batutorcid logoBjörn Grüning avatar Björn Grüning

Funding

These individuals or organisations provided funding support for the development of this resource