Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMatthias Bernt avatar Matthias BerntGoodnews Sandy avatar Goodnews Sandyorcid logoTristan Reynolds avatar Tristan ReynoldsWilliam Durand avatar William DurandAlaa Elghamry avatar Alaa ElghamrySarah Peter avatar Sarah Peterorcid logoFlorian Heyl avatar Florian Heylorcid logoMelanie Föll avatar Melanie Föllorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoNate Coraor avatar Nate Coraororcid logoPavankumar Videm avatar Pavankumar Videmorcid logoMarius van den Beek avatar Marius van den Beekorcid logoBérénice Batut avatar Bérénice BatutMichele Maroni avatar Michele MaroniScott Cain avatar Scott Cainorcid logoBjörn Grüning avatar Björn Grüningorcid logoMaria Doyle avatar Maria Doyleorcid logoNadia Goué avatar Nadia GouéAndrea Bagnacani avatar Andrea Bagnacaniorcid logoCristóbal Gallardo avatar Cristóbal GallardoAnton Nekrutenko avatar Anton Nekrutenkoorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoBert Droesbeke avatar Bert DroesbekeGareth Price avatar Gareth Priceorcid logoPeter van Heusden avatar Peter van HeusdenMirela Minkova avatar Mirela MinkovaMehmet Tekman avatar Mehmet Tekmanorcid logoSaskia Hiltemann avatar Saskia HiltemannMélanie Pétéra avatar Mélanie Pétéraorcid logoTeresa Müller avatar Teresa MüllerChristopher Barnett avatar Christopher BarnettDavid López avatar David Lópezorcid logoRand Zoabi avatar Rand Zoabiorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoClemens Blank avatar Clemens Blankorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoMartin Čech avatar Martin Čechorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoAnup Kumar avatar Anup KumarDonny Vrins avatar Donny VrinsGildas Le Corguillé avatar Gildas Le CorguilléSebastian Schaaf avatar Sebastian SchaafCyril Monjeaud avatar Cyril Monjeaudorcid logoJohn Davis avatar John Davisorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoNicola Soranzo avatar Nicola SoranzoYongbin Li avatar Yongbin Liorcid logoDave Clements avatar Dave Clementsorcid logoMarisa Loach avatar Marisa Loachorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoArmin Dadras avatar Armin Dadrasorcid logoLucille Delisle avatar Lucille Delisleorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoWendi Bacon avatar Wendi Baconorcid logoAnna Syme avatar Anna SymeJoachim Wolff avatar Joachim WolffDilmurat Yusuf avatar Dilmurat YusufNiall Beard avatar Niall Beardorcid logoRenato Alves avatar Renato Alvesorcid logoHelena Rasche avatar Helena Rascheorcid logoPhil Reed avatar Phil Reedorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoWolfgang Maier avatar Wolfgang MaierOlha Nahorna avatar Olha NahornaAnne Pajon avatar Anne Pajonorcid logoMorgan Howells avatar Morgan Howellsorcid logoAnne Fouilloux avatar Anne Fouilloux

Funding

These individuals or organisations provided funding support for the development of this resource