Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

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First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoDaniela Schneider avatar Daniela SchneiderGareth Price avatar Gareth Priceorcid logoNadia Goué avatar Nadia GouéAnne Pajon avatar Anne PajonOlha Nahorna avatar Olha Nahornaorcid logoBjörn Grüning avatar Björn GrüningChristopher Barnett avatar Christopher Barnettorcid logoAnne Fouilloux avatar Anne FouillouxSebastian Schaaf avatar Sebastian SchaafSarah Peter avatar Sarah Peterorcid logoCristóbal Gallardo avatar Cristóbal Gallardoorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoYvan Le Bras avatar Yvan Le BrasAlaa Elghamry avatar Alaa Elghamryorcid logoBert Droesbeke avatar Bert DroesbekeMirela Minkova avatar Mirela Minkovaorcid logoLucille Delisle avatar Lucille Delisleorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoPhil Reed avatar Phil Reedorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoClemens Blank avatar Clemens Blankorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoPavankumar Videm avatar Pavankumar Videmorcid logoMatthias Bernt avatar Matthias Berntorcid logoWendi Bacon avatar Wendi BaconYongbin Li avatar Yongbin LiJoachim Wolff avatar Joachim Wolfforcid logoHelena Rasche avatar Helena RascheNiall Beard avatar Niall BeardAnton Nekrutenko avatar Anton Nekrutenkoorcid logoAnna Syme avatar Anna Symeorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoRand Zoabi avatar Rand ZoabiDilmurat Yusuf avatar Dilmurat YusufScott Cain avatar Scott CainGoodnews Sandy avatar Goodnews SandyMélanie Pétéra avatar Mélanie Pétéraorcid logoMelanie Föll avatar Melanie FöllMichele Maroni avatar Michele MaroniCyril Monjeaud avatar Cyril Monjeaudorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoJohn Davis avatar John DavisGildas Le Corguillé avatar Gildas Le Corguilléorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoTeresa Müller avatar Teresa Müllerorcid logoNate Coraor avatar Nate CoraorDavid López avatar David Lópezorcid logoMarius van den Beek avatar Marius van den BeekWilliam Durand avatar William Durandorcid logoMarisa Loach avatar Marisa LoachMehmet Tekman avatar Mehmet Tekmanorcid logoDeepti Varshney avatar Deepti VarshneyAndrea Bagnacani avatar Andrea Bagnacaniorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoArmin Dadras avatar Armin Dadrasorcid logoRenato Alves avatar Renato Alvesorcid logoFlorian Heyl avatar Florian Heylorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoMaria Doyle avatar Maria DoyleDonny Vrins avatar Donny Vrinsorcid logoMartin Čech avatar Martin Čechorcid logoDaniel Blankenberg avatar Daniel Blankenbergorcid logoBérénice Batut avatar Bérénice Batutorcid logoMorgan Howells avatar Morgan Howellsorcid logoAnup Kumar avatar Anup Kumarorcid logoDave Clements avatar Dave Clements

Funding

These individuals or organisations provided funding support for the development of this resource