Björn Grüning

Affiliations

Contributions

The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

GitHub Activity

• github Pull Requests
• github Commits
• github Issues Reported

Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Galaxy Server administration
• Computational chemistry
• Contributing to the Galaxy Training Material
• Proteomics
• Variant Analysis

Tutorials

• Proteomics / Protein FASTA Database Handling
• Proteomics / Detection and quantitation of N-termini (degradomics) via N-TAILS
• Proteomics / Mass spectrometry imaging: Loading and exploring MSI data
• Proteomics / Label-free versus Labelled - How to Choose Your Quantitation Method
• Proteomics / Peptide and Protein ID using OpenMS tools
• Proteomics / Secretome Prediction
• Proteomics / Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
• Proteomics / Peptide and Protein ID using SearchGUI and PeptideShaker
• Teaching and Hosting Galaxy training / Running a workshop as instructor
• Genome Annotation / Genome Annotation
• Transcriptomics / Pathway analysis with the MINERVA Platform 🖥
• Variant Analysis / Exome sequencing data analysis for diagnosing a genetic disease
• Introduction to Galaxy Analyses / From peaks to genes
• Introduction to Galaxy Analyses / Galaxy Basics for genomics
• Development in Galaxy / JavaScript plugins
• Development in Galaxy / Galaxy Webhooks
• Galaxy Server administration / Galaxy Database schema
• Galaxy Server administration / Mapping Jobs to Destinations using TPV ✍️
• Galaxy Server administration / Connecting Galaxy to a compute cluster
• Galaxy Server administration / Galaxy Monitoring with Reports
• Computational chemistry / High Throughput Molecular Dynamics and Analysis
• Using Galaxy and Managing your Data / Understanding Galaxy history system 📝
• Contributing to the Galaxy Training Material / Running the GTN website locally
• Contributing to the Galaxy Training Material / Creating content in Markdown 📝
• Contributing to the Galaxy Training Material / Tools, Data, and Workflows for tutorials
• Contributing to the Galaxy Training Material / Creating Interactive Galaxy Tours
• Single Cell / Single-cell ATAC-seq standard processing with SnapATAC2 📝

Slides

• Development in Galaxy / Tool Dependencies and Containers
• Development in Galaxy / Visualizations: JavaScript Plugins
• Development in Galaxy / Galaxy Interactive Environments
• Development in Galaxy / Galaxy Code Architecture
• Development in Galaxy / Galaxy Interactive Tours
• Development in Galaxy / Tool development and integration into Galaxy
• Development in Galaxy / Galaxy Webhooks
• Development in Galaxy / Tool Dependencies and Conda
• Galaxy Server administration / Galaxy Monitoring with gxadmin
• Galaxy Server administration / Galaxy Monitoring with Telegraf and Grafana
• Galaxy Server administration / Galaxy from an administrator's point of view
• Galaxy Server administration / Advanced customisation of a Galaxy instance
• Galaxy Server administration / Server Maintenance: Cleanup, Backup, and Restoration
• Galaxy Server administration / Galaxy Monitoring
• Galaxy Server administration / Connecting Galaxy to a compute cluster ✍️
• Galaxy Server administration / Docker and Galaxy
• Galaxy Server administration / Server: Other
• Galaxy Server administration / User, Role, Group, Quota, and Authentication managment ✍️

Events

• 2023 Galaxy Admin Training (Ghent) 🎪

News

External Links

Favourite Topics

Favourite Formats