FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

orcid logoRobert Andrews avatar Robert Andrewsorcid logoEli Chadwick avatar Eli Chadwickorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoJulia Jakiela avatar Julia JakielaSonal Henson avatar Sonal Hensonorcid logoPaul De Geest avatar Paul De Geestorcid logoSimone Leo avatar Simone Leoorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoAndrew Mason avatar Andrew Masonorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoTeresa Müller avatar Teresa MüllerLaura Cooper avatar Laura CooperDavid López avatar David Lópezorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoKevin Frey avatar Kevin Freyorcid logoWendi Bacon avatar Wendi Baconorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoBjörn Grüning avatar Björn Grüningorcid logoXenia Perez Sitja avatar Xenia Perez Sitjaorcid logoNick Juty avatar Nick Jutyorcid logoHelena Rasche avatar Helena RascheKorneel Hens avatar Korneel Hensorcid logoMartin Kuhl avatar Martin KuhlMarie Josse avatar Marie Josseorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoMartin Čech avatar Martin ČechLaura Cooper avatar Laura Cooperorcid logoEmily Angiolini avatar Emily AngioliniTim Beck avatar Tim Beckorcid logoBranka Franicevic avatar Branka Franicevicorcid logoPeter Sefton avatar Peter Seftonorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoSara Morsy avatar Sara MorsySandra Ng avatar Sandra Ngorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoLuca Pireddu avatar Luca PiredduGareth Price avatar Gareth Priceorcid logoArmin Dadras avatar Armin DadrasKellie Snow avatar Kellie Snoworcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoSabrina Zander avatar Sabrina Zanderorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-Gonzalezorcid logoCristina Martins Rodrigues avatar Cristina Martins RodriguesStella Eggels avatar Stella Eggels

Funding

These individuals or organisations provided funding support for the development of this resource