As part of our work under the Gallantries Grant we are establishing a new topic within the GTN specifically focused on Data Science skills. This topic will include tutorials covering things such as:
Full StoryYvan Le Bras
Affiliations
Contributions
The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Editorial Roles
This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.
- Foundations of Data Science
- Ecology
- Sequence analysis
- Introduction to Galaxy and Ecological data analysis
- Gallantries Grant - Intellectual Output 4 - Data analysis and modelling for evidence and hypothesis generation and knowledge discovery
Tutorials
- Development in Galaxy / Galaxy Interactive Tools
- Ecology / Metabarcoding/eDNA through Obitools ✍️
- Ecology / RAD-Seq to construct genetic maps
- Ecology / RAD-Seq de-novo data analysis
- Ecology / Obis marine indicators ✍️
- Ecology / Cleaning GBIF data for the use in Ecology ✍️
- Ecology / Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities ✍️ 📝
- Ecology / Sentinel 2 biodiversity ✍️
- Ecology / Species distribution modeling
- Ecology / QGIS Web Feature Services ✍️
- Ecology / RAD-Seq Reference-based data analysis
- Ecology / Regional GAM
- Ecology / Biodiversity data exploration ✍️
- Ecology / Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS ✍️ 📝
- Ecology / Visualize EBV cube data with Panoply netCDF viewer ✍️
- Ecology / Compute and analyze biodiversity metrics with PAMPA toolsuite ✍️
- Ecology / Ecoregionalization workflow tutorial ⚙️
- Ecology / Champs blocs indicators ✍️
- Ecology / Production d'indicateurs champs de bloc
Slides
- Epigenetics / Introduction to DNA Methylation data analysis
- Variant Analysis / Introduction to Variant analysis
Video Recordings
News
12 October 2021
External Links
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