Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

John Chilton

Anne Pajon

Elizabeth Sheets

Gildas Le Corguillé

Helena Rasche

Anne Fouilloux

Björn Grüning

Nate Coraor

Boris Depoortere

Simon Bray

Fotis E. Psomopoulos

Bartosz Walkowicz

Łukasz Opioła

Adelaide Rhodes

Dave Clements

Marius van den Beek

Charles Overbeck

Mateusz Kuzak

Maria Doyle

Daniela Butano

Wolfgang Maier

Anton Nekrutenko

Nic Herndon

Ekaterina Polkh

Daniela Schneider

William Durand

Lucille Delisle

Avani Khadilkar

Miguel Roncoroni

Clea Siguret

Deepti Varshney

Nicola Soranzo

Laila Los

Saskia Hiltemann

Delphine Lariviere

Aysam Guerler

Anthony Bretaudeau

Bert Droesbeke

Armin Dadras

Jon Trow

Teresa Müller

Wendi Bacon

Cristóbal Gallardo

Niall Beard

Martin Čech

Lisanna Paladin

Yvan Le Bras

Toby Hodges

Yo Yehudi

Nadia Goué

Simon Gladman

Enis Afgan

Bérénice Batut

Ahmed Hamid Awan

Funding

These individuals or organisations provided funding support for the development of this resource

Melbourne Bioinformatics

BioNT

Co-funded by the European Union

UFR

Australian BioCommons

de.NBI

IFB

ABRomics

The University of Melbourne

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ELIXIR Europe