Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Yo Yehudi

Dave Clements

Nadia Goué

Niall Beard

Maria Doyle

Helena Rasche

Łukasz Opioła

Deepti Varshney

Marius van den Beek

Clea Siguret

Nicola Soranzo

Ahmed Hamid Awan

Daniela Butano

Bartosz Walkowicz

Laila Los

Bérénice Batut

Saskia Hiltemann

Simon Bray

Anthony Bretaudeau

Aysam Guerler

Lucille Delisle

Nic Herndon

Yvan Le Bras

Jon Trow

Enis Afgan

Charles Overbeck

Anne Fouilloux

Bert Droesbeke

Simon Gladman

Daniela Schneider

Ekaterina Polkh

Miguel Roncoroni

Martin Čech

Delphine Lariviere

Adelaide Rhodes

Armin Dadras

Gildas Le Corguillé

Nate Coraor

Toby Hodges

Wolfgang Maier

Boris Depoortere

Avani Khadilkar

Fotis E. Psomopoulos

William Durand

Lisanna Paladin

Cristóbal Gallardo

Elizabeth Sheets

Anne Pajon

Wendi Bacon

John Chilton

Anton Nekrutenko

Björn Grüning

Teresa Müller

Mateusz Kuzak

Funding

These individuals or organisations provided funding support for the development of this resource

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

IFB

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

BioNT

Co-funded by the European Union

UFR

de.NBI

Australian BioCommons

Melbourne Bioinformatics

ELIXIR Europe

The University of Melbourne

ABRomics