Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Marius van den Beek

William Durand

Nate Coraor

Łukasz Opioła

Toby Hodges

Dave Clements

Björn Grüning

Lucille Delisle

Simon Bray

Laila Los

Yo Yehudi

Enis Afgan

Ahmed Hamid Awan

Anne Pajon

Simon Gladman

Bérénice Batut

Deepti Varshney

Clea Siguret

Yvan Le Bras

Martin Čech

Daniela Schneider

Fotis E. Psomopoulos

Wolfgang Maier

Anton Nekrutenko

Ekaterina Polkh

Armin Dadras

Lisanna Paladin

Jon Trow

Mateusz Kuzak

Boris Depoortere

Miguel Roncoroni

Nic Herndon

Helena Rasche

Saskia Hiltemann

Wendi Bacon

John Chilton

Niall Beard

Teresa Müller

Maria Doyle

Cristóbal Gallardo

Nadia Goué

Bartosz Walkowicz

Anne Fouilloux

Elizabeth Sheets

Delphine Lariviere

Charles Overbeck

Anthony Bretaudeau

Nicola Soranzo

Daniela Butano

Aysam Guerler

Adelaide Rhodes

Bert Droesbeke

Avani Khadilkar

Funding

These individuals or organisations provided funding support for the development of this resource

ABRomics

IFB

BioNT

Co-funded by the European Union

UFR

de.NBI

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ELIXIR Europe

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.