Using Galaxy and Managing your Data

A collection of microtutorials explaining various features of the Galaxy user interface and manipulating data within Galaxy.

Requirements

Before diving into this topic, we recommend you to have a look at:

• tutorial Hands-on: Galaxy Basics for genomics

Material

Uploading Data

These tutorials will help you get data into Galaxy, before you analyse it.

Histories

Managing your analysis histories efficiently

Making Data Manageable

Now that you have data in Galaxy, let's make it easier to work with through collections and structured data.

Workflows

Using Galaxy workflows to scale analysis

Analysing Data

Some advanced topics in data analysis.

Download and free up space

Once you are done with your analyses in Galaxy, it's time to download your data and free up space.

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Jennifer Hillman-Jackson

Delphine Lariviere

Teresa Müller

Are you on the editorial board or want to help out with this topic? View the topic maintainer page for ways to improve this topic!

Contributors

This material was contributed to by:

Miguel Roncoroni

Cristóbal Gallardo

Marius van den Beek

Martin Čech

Wendi Bacon

Helena Rasche

Wolfgang Maier

Clea Siguret

Anup Kumar

Yvan Le Bras

Nate Coraor

Pavankumar Videm

Deepti Varshney

Gildas Le Corguillé

Anne Pajon

Rita Gautschy

Laila Los

Enis Afgan

Adelaide Rhodes

Delphine Lariviere

Nadia Goué

Fotis E. Psomopoulos

Simon Bray

Mateusz Kuzak

Nicola Soranzo

Björn Grüning

Bert Droesbeke

Daniela Schneider

William Durand

Nic Herndon

Bérénice Batut

Toby Hodges

Dave Clements

Avani Khadilkar

Ekaterina Polkh

Ahmed Hamid Awan

Aysam Guerler

Daniela Butano

Niall Beard

Simon Gladman

Jon Trow

Teresa Müller

Lisanna Paladin

Anne Fouilloux

Łukasz Opioła

Armin Dadras

Bartosz Walkowicz

Anthony Bretaudeau

Elizabeth Sheets

Yo Yehudi

Saskia Hiltemann

Charles Overbeck

Maria Doyle

Anton Nekrutenko

Boris Depoortere

John Chilton

Lucille Delisle

Funding

These individuals or organisations provided funding support for the development of this resource

IFB

BioNT

Co-funded by the European Union

ABRomics

Australian BioCommons

UFR

MWK

Melbourne Bioinformatics

de.KCD

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ELIXIR Europe

de.NBI

The University of Melbourne