Simon Gladman
In Memoriam
Simon Gladman, system administrator of UseGalaxy.org.au, passed away on November 26, 2022
He was a fantastic teacher, tutorial author, system administrator, and warm and welcoming friend. He contributed heavily to the Galaxy Training Network and especially the Galaxy Administration community over the years, we will miss him dearly. The GTN and GAT would not be what they are today, without him.
“Have I told you about my watch?”
Contributions
The following list includes only slides and tutorials where the individual has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
GitHub Activity
Editorial Roles
This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.
Tutorials
- Genome Annotation / Genome annotation with Prokka
- Using Galaxy and Managing your Data / Downloading and Deleting Data in Galaxy
- Galaxy Server administration / Reference Data with CVMFS without Ansible
- Galaxy Server administration / Galaxy Interactive Tools ✍️
- Galaxy Server administration / Galaxy Monitoring with Reports
- Galaxy Server administration / Reference Data with Data Managers ✍️
- Galaxy Server administration / Upgrading Galaxy
- Galaxy Server administration / Galaxy Installation with Ansible ✍️
- Galaxy Server administration / Reference Data with CVMFS
- Galaxy Server administration / Running Jobs on Remote Resources with Pulsar
- Variant Analysis / M. tuberculosis Variant Analysis
- Variant Analysis / Microbial Variant Calling
- Assembly / An Introduction to Genome Assembly
- Assembly / De Bruijn Graph Assembly
- Assembly / Unicycler Assembly
Slides
- Genome Annotation / Genome annotation with Prokka
- Galaxy Server administration / uWSGI
- Galaxy Server administration / Galaxy Tool Management with Ephemeris
- Galaxy Server administration / Server: Other
- Galaxy Server administration / Server Maintenance: Cleanup, Backup, and Restoration
- Galaxy Server administration / Galaxy on the Cloud
- Galaxy Server administration / Reference Genomes in Galaxy
- Galaxy Server administration / Galaxy Monitoring with Telegraf and Grafana
- Galaxy Server administration / Galaxy Installation with Ansible ✍️
- Galaxy Server administration / Galaxy Monitoring with gxadmin
- Galaxy Server administration / Reference Data with CVMFS
- Galaxy Server administration / Galaxy Monitoring
- Galaxy Server administration / Running Jobs on Remote Resources with Pulsar
- Assembly / An Introduction to Genome Assembly
- Assembly / Deeper look into Genome Assembly algorithms
- Assembly / De Bruijn Graph Assembly
- Assembly / Unicycler Assembly
Video Recordings
- Galaxy Server administration / Running Jobs on Remote Resources with Pulsar 🗣
- Assembly / An Introduction to Genome Assembly 🗣
- Galaxy Server administration / Use Apptainer containers for running Galaxy jobs 💬 🗣
- Galaxy Server administration / Upgrading Galaxy 💬 🗣
- Galaxy Server administration / Reference Data with CVMFS 💬 🗣
- Galaxy Server administration / Running Jobs on Remote Resources with Pulsar 🗣 💬
Events
External Links
Favourite Topics
Favourite Formats