Contributing to the Galaxy Training Material

Galaxy is a great solution to train the bioinformatics concepts: numerous bioinformatics tools are available (more than 7,000 in the ToolShed), it can be used by people without any computer science skills, it trains to use technology, outlining available resources and efforts that have made them accessible to researchers, it is scalable.
In 2016, the Galaxy Training Network decided to set up a new infrastructure for delivering easily Galaxy related training material. The idea was to develop something open and online based on a community effort, as always in Galaxy.

Material

Before you start: Designing your lessons

These tutorials will guide you on the pedagogy to create impactful training material

Getting Started with the GTN

These tutorials will get you started with the basics needed to contribute to the GTN. First we will show you how you can build the GTN website on GitPod or locally, and then the basics of creating tutorials and slides.

Advanced GTN Materials writing

Tutorials showing you how to use some advanced GTN features in your training materials.

Contributing through GitHub

How to collaborate with the GTN

Analyses using GTN data

Over the years publications about the GTN and GTN communities have been published, and used GTN (meta)data to do it. These tutorials will show you how to leverage some of the data already contained within the GTN, but beware, they generally require programming skills!

Other

Assorted Tutorials

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

Editorial Board

This material is reviewed by our Editorial Board:

Bérénice Batut

Björn Grüning

Contributors

This material was contributed to by:

Simon Gladman

Armin Dadras

Аrnaud Gingold

Martin Čech

Wendi Bacon

Melissa Burke

Pablo Moreno

Niall Beard

Peter van Heusden

Bazante Sanders

Sonja Filiposka

Linelle Abueg

Vojdan Kjorveziroski

Lucille Delisle

Gildas Le Corguillé

Phil Reed

Fotis E. Psomopoulos

Bert Droesbeke

Marie Josse

Patricia Palagi

Donny Vrins

Marisa Loach

Achim Winandi

Cyril Monjeaud

Katarzyna Kamieniecka

Mehmet Tekman

Anthony Bretaudeau

Helena Rasche

Nicola Soranzo

Anastas Mishev

Krzysztof Poterlowicz

Carolin Leister

Marius van den Beek

Pavankumar Videm

Saskia Hiltemann

Irakleitos Souyioultzoglou

Björn Grüning

Andrea Bagnacani

Teresa Müller

Allegra Via

Bérénice Batut

Christine Hadrossek

Cristóbal Gallardo

Julia Jakiela

William Durand

Dominique Green

Simon Bray

Funding

These individuals or organisations provided funding support for the development of this resource

Skills4SEOSC

UFR

de.NBI

ELIXIR Europe

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

DASH UK

This Fellowship was funded through the ELIXIR-UK DaSH project as part of the UKRI Innovation Scholars: Data Science Training in Health and Bioscience call (DaSH). (MR/V038966/1). The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources.