Pablo Moreno

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

1 Editorial Role

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Learning Pathway: Applying single-cell RNA-seq analysis

16 Tutorials

• Contributing to the Galaxy Training Material / Creating content in Markdown 🧐
• Single Cell / Converting NCBI Data to the AnnData Format 🧐
• Single Cell / GO Enrichment Analysis on Single-Cell RNA-Seq Data 📝 🧐
• Single Cell / Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution 🧐
• Single Cell / Converting between common single cell data formats 🧐
• Single Cell / Filter, plot and explore single-cell RNA-seq data with Scanpy 🧐
• Single Cell / Inferring single cell trajectories with Monocle3 🧐
• Single Cell / Filter, plot, and explore single cell RNA-seq data with Seurat 🖥
• Single Cell / Importing files from public atlases 🧐
• Single Cell / Generating a single cell matrix using Alevin and combining datasets (bash + R) 🧐
• Single Cell / Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution 🧐
• Single Cell / Combining single cell datasets after pre-processing 🧐
• Galaxy Server administration / Managing Galaxy on Kubernetes ✍️
• Galaxy Server administration / Galaxy Installation on Kubernetes ✍️
• Ecology / Production d'indicateurs champs de bloc 🧐

1 Slide

• Single Cell / GO Enrichment Analysis on Single-Cell RNA-Seq Data 🧐

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GitHub Activity

github Issues Reported

1 Merged Pull Requests

See all of the github Pull Requests and github Commits by Pablo Moreno.

• SC basic: Asks to use Final matrix, should be asking for Final object

Reviewed 3 PRs

We love our community reviewing each other's work!

• Adding single cell GO enrichment tutorial
  template-and-tools
  single-cell
• New tutorial - single cell data import and format conversion
  template-and-tools
  contributing
  new tutorial
  ecology
  news
• link EBI data retrieval into the filter/plot/explore
  single-cell

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