Melbourne Bioinformatics

Members

These GTN contributors have noted that they are affiliated in some way with this organisation. This list is non-exhaustive, and randomly ordered.

Former Members

These individuals have noted that they previously were affiliated in some way with this organisation. This list is non-exhaustive.

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

39 Tutorials

• FAIR Data, Workflows, and Research / Integrating InvenioRDM-compatible Repositories with Galaxy 💵
• FAIR Data, Workflows, and Research / Uploading Data to Zenodo from Galaxy 💵
• Variant Analysis / M. tuberculosis Variant Analysis 💵
• Variant Analysis / Microbial Variant Calling 💵
• Assembly / Hybrid genome assembly - Nanopore and Illumina 💵
• Assembly / Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data) 💵
• Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step 💵
• Assembly / Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data 💵
• Assembly / Chloroplast genome assembly 💵
• Assembly / An Introduction to Genome Assembly 💵
• Assembly / De Bruijn Graph Assembly 💵
• Assembly / Large genome assembly and polishing 💵
• Assembly / Unicycler Assembly 💵
• Genome Annotation / Genome annotation with Prokka 💵
• Genome Annotation / Identification of AMR genes in an assembled bacterial genome 💵
• Galaxy Server administration / Reference Data with Data Managers 💵
• Galaxy Server administration / Reference Data with CVMFS 💵
• Galaxy Server administration / Galaxy Installation with Ansible 💵
• Galaxy Server administration / Galaxy Monitoring with Reports 💵
• Galaxy Server administration / Reference Data with CVMFS without Ansible 💵
• Galaxy Server administration / Running Jobs on Remote Resources with Pulsar 💵
• Galaxy Server administration / Galaxy Interactive Tools 💵
• Galaxy Server administration / Upgrading Galaxy 💵
• Introduction to Galaxy Analyses / A short introduction to Galaxy 💵
• Introduction to Galaxy Analyses / Best Practices for Citing Galaxy 💵
• Epigenetics / Hi-C analysis of Drosophila melanogaster cells using HiCExplorer 💵
• Epigenetics / Formation of the Super-Structures on the Inactive X 💵
• Epigenetics / ATAC-Seq data analysis 💵
• Microbiome / Taxonomic Profiling and Visualization of Metagenomic Data 💵
• Microbiome / 16S Microbial Analysis with mothur (short) 💵
• Microbiome / 16S Microbial Analysis with mothur (extended) 💵
• Ecology / Checking expected species and contamination in bacterial isolate 💵
• Using Galaxy and Managing your Data / Downloading and Deleting Data in Galaxy 💵
• Sequence analysis / Quality and contamination control in bacterial isolate using Illumina MiSeq Data 💵
• Sequence analysis / Mapping 💵
• Sequence analysis / Mapping 💵
• Introduction to Galaxy Analyses / Breve introducción a Galaxy - en español 💵
• Sequence analysis / Mapeo 💵
• Sequence analysis / Mappatura 💵

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External Links

Website: https://mdhs.unimelb.edu.au/melbournebioinformatics

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