Statistics and machine learning

Statistical Analyses for omics data and machine learning using Galaxy tools

Requirements

Before diving into this topic, we recommend you to have a look at:

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.
Lesson Slides Hands-on Recordings Input dataset Workflows
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
Age prediction using machine learning
Basics of machine learning
Building the LORIS LLR6 PanCancer Model Using PyCaret
Classification in Machine Learning
Clustering in Machine Learning
Deep Learning (Part 1) - Feedforward neural networks (FNN)
Deep Learning (Part 2) - Recurrent neural networks (RNN)
Deep Learning (Part 3) - Convolutional neural networks (CNN)
Fine tune large protein model (ProtTrans) using HuggingFace
Image classification in Galaxy with fruit 360 dataset
Interval-Wise Testing for omics data
Introduction to Machine Learning using R
Introduction to deep learning
Machine learning: classification and regression
PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis
Regression in Machine Learning
Supervised Learning with Hyperdimensional Computing
Text-Mining Differences in Chinese Newspaper Articles
Text-mining with the SimText toolset
Train and Test a Deep learning image classifier with Galaxy-Ludwig

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Editorial Board

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Contributors

This material was contributed to by:

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Funding

These individuals or organisations provided funding support for the development of this resource