Alex Ostrovsky

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

8 Tutorials

• Assembly / Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data ✍️
• Assembly / Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step ✍️
• Variant Analysis / Calling variants in non-diploid systems ✍️ 🧐
• Development in Galaxy / Creating Galaxy tools from Conda Through Deployment ✍️ 🧐
• Single Cell / Downstream Single-cell RNA analysis with RaceID ✍️
• Introduction to Galaxy Analyses / Galaxy Basics for everyone 🧐

4 Slides

• Development in Galaxy / Tool Dependencies and Conda 🧐
• Development in Galaxy / Tool Dependencies and Containers 🧐
• Single Cell / Dealing with Cross-Contamination in Fixed Barcode Protocols ✍️
• Single Cell / Plates, Batches, and Barcodes ✍️

2 FAQs

• The folder `recipes/belerophon/` and the file `meta.yaml` already exist in bioconda?
• Where can I get planemo?

6 Video Recordings

• Development in Galaxy / Creating Galaxy tools from Conda Through Deployment 💬 🗣
• Introduction to Galaxy Analyses / Galaxy Basics for everyone 💬 🗣

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GitHub Activity

github Issues Reported

8 Merged Pull Requests

See all of the github Pull Requests and github Commits by Alex Ostrovsky.

• Add my orcid
  template-and-tools
• Add tools from scratch training
• add vgp training skeleton from workflow (hidden)
• workflows updated with newer tools, added missing
• Data link modernized

Reviewed 2 PRs

We love our community reviewing each other's work!

• Add tools from scratch training
• workflows updated with newer tools, added missing

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