Genome annotation for prokaryotes

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Comment: What is a Learning Pathway?
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We recommend you follow the tutorials in the order presented on this page. They have been selected to fit together and build up your knowledge step by step. If a lesson has both slides and a tutorial, we recommend you start with the slides, then proceed with the tutorial.

Learn how to annotate a prokaryotic genome sequence: find the position and function of genes, and even set up a manual curation environment with Apollo.

Module 1: Introduction

General introduction to genome annotation

Lesson Slides Hands-on Recordings
Introduction to Genome Annotation

Module 2: Gene calling and functional annotation

In this module you will learn to run tools to find the position of genes and other genomic components and to functionally annotate them

Lesson Slides Hands-on Recordings
Bacterial Genome Annotation

Module 3: Manual curation

Automatic annotation is rarely perfect, in this module you will learn how to start a collaborative manual curation project using Galaxy and Apollo

Lesson Slides Hands-on Recordings
Refining Genome Annotations with Apollo (prokaryotes)

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoAnthony Bretaudeau avatar Anthony Bretaudeau

Funding

These individuals or organisations provided funding support for the development of this resource