Inspect AnnData: object

Metadata

Servers Offering this Tool

UseGalaxy.eu (0.7.5+galaxy1)

This is a guess, we are not currently checking if that is actually present.

Observed Tool Versions

Within GTN tutorials

• 0.7.5+galaxy1
• 0.10.3+galaxy0

EDAM Operations

EDAM Topics

Relevant Tutorials

• Single Cell / Matrix Exchange Format to ESet | Creating a single-cell RNA-seq reference dataset for deconvolution
• Single Cell / Pre-processing of 10X Single-Cell ATAC-seq Datasets
• Single Cell / Single-cell ATAC-seq standard processing with SnapATAC2
• Single Cell / Combining single cell datasets after pre-processing
• Single Cell / Filter, plot and explore single-cell RNA-seq data with Scanpy
• Single Cell / Removing the effects of the cell cycle
• Single Cell / Inferring single cell trajectories with Monocle3
• Single Cell / Converting between common single cell data formats
• Single Cell / Converting NCBI Data to the AnnData Format
• Single Cell / Clustering 3K PBMCs with Scanpy