Marie Josse

Affiliations

Contributions

The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.

Editorial Roles

This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.

• Topic: Climate
• Learning Pathway: Discovering Galaxy through climate analysis
• Learning Pathway: Tool development for a nice & shiny subdomain

Tutorials

• Galaxy Community Building / Creation of a Galaxy tutorial table for your community 🧐
• Galaxy Community Building / Creation of the labs in the different Galaxy instances for your community 🧐
• Galaxy Community Building / Creation of resources listing Galaxy workflow for your community 🧐
• Galaxy Community Building / Creation of resources listing all the tools and their metadata relevant to your community 🧐
• Galaxy Community Building / Make your tools available on your subdomain ✍️ 🧐
• Development in Galaxy / Galaxy Interactive Tools ✍️ 🧐
• Galaxy Server administration / Adding file-sources to Galaxy ✍️
• Galaxy Server administration / Create a subdomain for your community on UseGalaxy.eu ✍️ 🧐
• Ecology / From NDVI data with OpenEO to time series visualisation with Holoviews ✍️ 🧐
• Ecology / Visualize EBV cube data with Panoply netCDF viewer ✍️
• Ecology / Champs blocs indicators ✍️
• Ecology / Marine Omics identifying biosynthetic gene clusters ✍️
• Ecology / Sentinel 2 biodiversity ✍️
• Ecology / QGIS Web Feature Services ✍️ 🧐
• Ecology / Ecoregionalization workflow tutorial ⚙️
• Ecology / Obis marine indicators ✍️ 🧐
• Ecology / Biodiversity data exploration ✍️
• Contributing to the Galaxy Training Material / Tools, Data, and Workflows for tutorials 🧐
• FAIR Data, Workflows, and Research / Exporting Workflow Run RO-Crates from Galaxy 📝 🧐
• Climate / Ocean's variables study ✍️ 🧐
• Climate / Nitrate DMQC for autonomous platforms such as Argo floats ✍️ 🧐
• Climate / Analyse Argo data ✍️ 🧐
• Climate / Getting your hands-on earth data ✍️ 🧐
• Climate / Ocean Data View (ODV) ✍️ 🧐
• Climate / Sentinel 5P data visualisation ✍️
• Ecology / Production d'indicateurs champs de bloc ✍️

Slides

• FAIR Data, Workflows, and Research / An earth-system RO-Crate ✍️

FAQs

• Creating a dataset collection with autobuild
• Running a workflow

Events

• Galaxy Beyond Basics: Mastering Workflows, Automation, and Scalability 🎪 🧑‍🏫

GitHub Activity

github Issues Reported

29 Merged Pull Requests

See all of the github Pull Requests and github Commits by Marie Josse.

• Review community tuto
• Qcv analysis update
  template-and-tools
  climate
  faqs
• Add new earth system tuto on ocean
  climate
• Add first file-source tutorial
  admin
• Subdomain pathway
  template-and-tools

Reviewed 17 PRs

We love our community reviewing each other's work!

• Review community tuto
• Qcv analysis update
  template-and-tools
  climate
  faqs
• Add new earth system tuto on ocean
  climate
• [WIP] de.yml for german translations
  template-and-tools
• Subdomain pathway
  template-and-tools

External Links

Favourite Topics

Favourite Formats