Mélanie Petera
Affiliations
Contributions
The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
Editorial Roles
This contributor has taken on additional responsibilities as an editor for the following topics. They are responsible for ensuring that the content is up to date, accurate, and follows GTN best practices.
- Topic: Metabolomics
Tutorials
- Galaxy Server administration / External Authentication 🧐
- Galaxy Server administration / Galaxy Installation with Ansible 🧐
- Transcriptomics / Reference-based RNAseq data analysis (long) 🧐
- Statistics and machine learning / Clustering in Machine Learning 🧐
- Introduction to Galaxy Analyses / Galaxy Basics for everyone 🧐
- Epigenetics / Infinium Human Methylation BeadChip 🧐
- Variant Analysis / Calling variants in non-diploid systems 🧐
- Variant Analysis / From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis 🧐
- Variant Analysis / M. tuberculosis Variant Analysis 🧐
- Proteomics / Label-free data analysis using MaxQuant 🧐
- Metabolomics / Mass spectrometry: LC-MS preprocessing with XCMS ✍️ 🧐
- Metabolomics / Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms) 🧐
- Metabolomics / Mass spectrometry: GC-MS analysis with the metaMS package 📝 🧐
- Metabolomics / Mass spectrometry: LC-MS data processing ✍️
- Metabolomics / Mass spectrometry: LC-MS analysis ✍️
Slides
GitHub Activity
github Issues Reported
8 Merged Pull Requests
See all of the github Pull Requests and github Commits by Mélanie Petera.
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Metabolomics - Update of "LCMS preprocessing with XCMS"
metabolomics -
[Metabo lcmsproc] Update of material and end of "In-dev" state
improvementreview-needed -
New tutotial: Metabolomics LC-MS data processing
review-needed -
Metabolomics - LCMS preprocessing update
review-needed -
Fix of some broken links
Reviewed 8 PRs
We love our community reviewing each other's work!
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[NEW] GTN Metabolomics gcms with metams
template-and-toolsmetabolomics -
add logos rfmf metabohub
template-and-tools -
Add tutorial: GC MS data processing [metabolomics]
template-and-toolsmetabolomics - github Auto Compress Images
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Metabolomics - Update of "LCMS preprocessing with XCMS"
metabolomics