We have just finished a new collection of training material for genome assembly and annotation! You now have access to slides and tutorials, focused on the complete analysis of the genome of a fungus species (Mucor mucedo).
Full StoryStéphanie Robin
Contributions
The following list includes only slides and tutorials where the individual or organisation has been added to the contributor list. This may not include the sum total of their contributions to the training materials (e.g. GTN css or design, tutorial datasets, workflow development, etc.) unless described by a news post.
Tutorials
- Assembly / Genome Assembly Quality Control ✍️
- Assembly / Genome assembly using PacBio data ✍️ 🧐
- Computational chemistry / High Throughput Molecular Dynamics and Analysis 🧐
- Visualisation / Genomic Data Visualisation with JBrowse 🧐
- Single Cell / Downstream Single-cell RNA analysis with RaceID 🧐
- Single Cell / Pre-processing of Single-Cell RNA Data 🧐
- Single Cell / Single-cell quality control with scater 🧐
- Genome Annotation / Long non-coding RNAs (lncRNAs) annotation with FEELnc ✍️
- Genome Annotation / Refining Genome Annotations with Apollo (prokaryotes) 🧐
- Genome Annotation / Genome annotation with Funannotate 📝 🧐
- Genome Annotation / Masking repeats with RepeatMasker ✍️ 🧐
- Sequence analysis / Quality Control ✍️
Slides
- Assembly / Genome assembly quality control. ✍️
- Assembly / An introduction to get started in genome assembly and annotation 📝
- Genome Annotation / Introduction to Genome Annotation 🧐
- Sequence analysis / Quality Control ✍️
Video Recordings
Events
GitHub Activity
github Issues Reported
3 Merged Pull Requests
See all of the github Pull Requests and github Commits by Stéphanie Robin.
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updating tutorial with new bam file
genome-annotation
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Add a new tutorial about lncRNAs annotation (with FEELnc)
genome-annotationnew tutorial
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Flye assembly
assemblynew tutorialnew contributor(s)
Reviewed 2 PRs
We love our community reviewing each other's work!
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Genome annotation: funannotate + repeatmasker tutorials
genome-annotation
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Flye assembly
assemblynew tutorialnew contributor(s)
News
1 December 2021
new tutorial
assembly
genome-annotation
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