GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Natalie Kucher

Björn Grüning

Alexandre Cormier

Katherine Cox

Simon Bray

Anna Syme

Nathan Dunn

Paul Zierep

Jonathan Kreplak

Deepti Varshney

Simon Gladman

Bérénice Batut

Bazante Sanders

Anton Nekrutenko

Laura Leroi

Tristan Reynolds

Teresa Müller

Daniela Butano

Torsten Seemann

Saskia Hiltemann

Ava Hoffman

Erwan Corre

Anthony Bretaudeau

Mateo Boudet

Elizabeth Humphries

Frederick Tan

Jasper Ouwerkerk

Candace Savonen

Robert Meller

Yo Yehudi

Miaomiao Zhou

Stéphanie Robin

Delphine Lariviere

Helena Rasche

Cristóbal Gallardo

Funding

These individuals or organisations provided funding support for the development of this resource

NHGRI GDS Community Network

ELIXIR Europe

Australian BioCommons

NHGRI ANVIL

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

ABRomics

Melbourne Bioinformatics

Avans

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

IFB

The University of Melbourne