GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

comment   Community Matrix Chat

Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Anton Nekrutenko

Bérénice Batut

Katherine Cox

Simon Bray

Teresa Müller

Björn Grüning

Jonathan Kreplak

Bazante Sanders

Helena Rasche

Mateo Boudet

Cristóbal Gallardo

Torsten Seemann

Laura Leroi

Frederick Tan

Saskia Hiltemann

Alexandre Cormier

Elizabeth Humphries

Ava Hoffman

Yo Yehudi

Erwan Corre

Nathan Dunn

Daniela Butano

Anna Syme

Jasper Ouwerkerk

Natalie Kucher

Miaomiao Zhou

Robert Meller

Stéphanie Robin

Delphine Lariviere

Simon Gladman

Anthony Bretaudeau

Deepti Varshney

Paul Zierep

Candace Savonen

Funding

These individuals or organisations provided funding support for the development of this resource

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

ABRomics

IFB

NHGRI ANVIL

ELIXIR Europe

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

NHGRI GDS Community Network

Avans