One Health

One Health is unified approach that aims to sustainably balance the health of humans, animals, and ecosystems, as all of the health of each of these groups is closely interlinked.

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

Material

Computational chemistry

Lesson Slides Hands-on Recordings Input dataset Workflows
Hands-on: Hands-on: Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring

Evolution

Lesson Slides Hands-on Recordings Input dataset Workflows
Hands-on: Hands-on: Identifying tuberculosis transmission links: from SNPs to transmission clusters
Hands-on: Hands-on: Tree thinking for tuberculosis evolution and epidemiology

Genome Annotation

Lesson Slides Hands-on Recordings Input dataset Workflows
Hands-on: Hands-on: Identification of AMR genes in an assembled bacterial genome

Variant Analysis

Lesson Slides Hands-on Recordings Input dataset Workflows
Hands-on: Hands-on: Avian influenza viral strain analysis from gene segment sequencing data
Hands-on: Hands-on: From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
Hands-on: Hands-on: M. tuberculosis Variant Analysis
Hands-on: Hands-on: Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
Hands-on: Hands-on: Pox virus genome analysis from tiled-amplicon sequencing data

Galaxy instances

You can use a public Galaxy instance which has been tested for the availability of the used tools. They are listed along with the tutorials above.

Editorial Board

This material is reviewed by our Editorial Board:

orcid logoWolfgang Maier avatar Wolfgang Maierorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoTomas Klingström avatar Tomas Klingströmorcid logoHelena Rasche avatar Helena Rasche

For any question related to this topic and the content, you can contact them or visit our Gitter channel.

Contributors

This material was contributed to by:

orcid logoMiaomiao Zhou avatar Miaomiao ZhouAnton Nekrutenko avatar Anton Nekrutenkoorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoTomas Klingström avatar Tomas KlingströmBazante Sanders avatar Bazante Sandersorcid logoBérénice Batut avatar Bérénice BatutMarius van den Beek avatar Marius van den BeekDaniela Brites avatar Daniela BritesAvans Hogeschool avatar Avans Hogeschoolorcid logoDave Clements avatar Dave Clementsorcid logoSimon Gladman avatar Simon Gladmanorcid logoSaskia Hiltemann avatar Saskia HiltemannGalo A. Goig avatar Galo A. Goigorcid logoDaniel Blankenberg avatar Daniel BlankenbergSimon Bray avatar Simon BrayThoba Lose avatar Thoba Loseorcid logoPeter van Heusden avatar Peter van HeusdenChristoph Stritt avatar Christoph Strittorcid logoHelena Rasche avatar Helena Rasche

Funders

This material was funded by:

ELIXIR-CONVERGE avatar ELIXIR-CONVERGEAddressing the dual emerging threats of African Swine Fever and Lumpy Skin Disease in Europe avatar DEFENDBeYond-COVID avatar BeYond-COVIDABRomics avatar ABRomics