GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

comment   Community Matrix Chat

Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Simon Bray

Delphine Lariviere

Jonathan Kreplak

Simon Gladman

Elizabeth Humphries

Anthony Bretaudeau

Yo Yehudi

Alexandre Cormier

Torsten Seemann

Anton Nekrutenko

Bazante Sanders

Deepti Varshney

Robert Meller

Laura Leroi

Erwan Corre

Nathan Dunn

Helena Rasche

Paul Zierep

Björn Grüning

Katherine Cox

Bérénice Batut

Stéphanie Robin

Teresa Müller

Daniela Butano

Miaomiao Zhou

Candace Savonen

Anna Syme

Ava Hoffman

Mateo Boudet

Saskia Hiltemann

Frederick Tan

Jasper Ouwerkerk

Cristóbal Gallardo

Natalie Kucher

Funding

These individuals or organisations provided funding support for the development of this resource

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

NHGRI GDS Community Network

NHGRI ANVIL

ABRomics

IFB

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

Avans

ELIXIR Europe