GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Elizabeth Humphries

Nathan Dunn

Simon Bray

Cristóbal Gallardo

Erwan Corre

Deepti Varshney

Jasper Ouwerkerk

Tristan Reynolds

Torsten Seemann

Stéphanie Robin

Delphine Lariviere

Candace Savonen

Jonathan Kreplak

Ava Hoffman

Laura Leroi

Paul Zierep

Mateo Boudet

Simon Gladman

Daniela Butano

Yo Yehudi

Frederick Tan

Alexandre Cormier

Katherine Cox

Anna Syme

Anton Nekrutenko

Miaomiao Zhou

Helena Rasche

Björn Grüning

Bazante Sanders

Bérénice Batut

Teresa Müller

Anthony Bretaudeau

Natalie Kucher

Robert Meller

Saskia Hiltemann

Funding

These individuals or organisations provided funding support for the development of this resource

NHGRI ANVIL

NHGRI GDS Community Network

IFB

ABRomics

ELIXIR Europe

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

Australian BioCommons

Avans

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.

The University of Melbourne

Melbourne Bioinformatics