GMOD

Tutorials from the world of the Generic Model Organism Database (GMOD)

GMOD is a collection of open source software tools for managing, visualising, storing, and disseminating genetic and genomic data, many of which are directly interoperable.

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Material

JBrowse 1

Learn to use JBrowse v1 here.

MAKER

Genome Annotation with MAKER.

InterMine

InterMine is a data warehouse you can query for interesting features and data.

Apollo v2

Apollo is a collaborative, real time genome annotation editor.

Editorial Board

This material is reviewed by our Editorial Board:

Helena Rasche

Anthony Bretaudeau

Contributors

This material was contributed to by:

Katherine Cox

Jasper Ouwerkerk

Bérénice Batut

Anna Syme

Nathan Dunn

Deepti Varshney

Cristóbal Gallardo

Mateo Boudet

Ava Hoffman

Teresa Müller

Helena Rasche

Erwan Corre

Daniela Butano

Delphine Lariviere

Tristan Reynolds

Elizabeth Humphries

Frederick Tan

Saskia Hiltemann

Natalie Kucher

Stéphanie Robin

Alexandre Cormier

Simon Gladman

Laura Leroi

Björn Grüning

Anthony Bretaudeau

Anton Nekrutenko

Robert Meller

Bazante Sanders

Simon Bray

Yo Yehudi

Torsten Seemann

Miaomiao Zhou

Paul Zierep

Jonathan Kreplak

Candace Savonen

Funding

These individuals or organisations provided funding support for the development of this resource

ELIXIR Europe

NHGRI GDS Community Network

EuroScienceGateway

EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963.

The University of Melbourne

Australian BioCommons

Melbourne Bioinformatics

IFB

Avans

NHGRI ANVIL

ABRomics

Gallantries

This project (2020-1-NL01-KA203-064717) is funded with the support of the Erasmus+ programme of the European Union. Their funding has supported a large number of tutorials within the GTN across a wide array of topics.