FAIR Data, Workflows, and Research

These lessons will teach you how to make your research objects more FAIR with practical, hands-on advice.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

FAIR Data Management

The FAIR (Findable, Accessible, Interoperable, Reusable) data stewardship created the foundation for sharing and publishing digital assets. These lessons will apply to machine accessibility and emphasize that all digital assets should share data in a way that will enable maximum use and reuse.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR in a nutshell
Integrating InvenioRDM-compatible Repositories with Galaxy
Introduction to Data Management Plan (DMP) for Peatland Research and PeatDataHub
Making clinical datasets FAIR
Sequence data submission to ENA
Uploading Data to Zenodo from Galaxy
FAIR data management solutions
FAIR Galaxy Training Material
FAIR Bioimage Metadata
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
FAIRification of an RNAseq dataset

Make workflows FAIR with RO-Crate

This section brought to you by the BY-COVID project, and will teach you how to make your research objects more FAIR with practical, hands-on advice.

Lesson Slides Hands-on Recordings Input dataset Workflows
RO-Crate - Introduction
Workflow Run RO-Crate Introduction
Exporting Workflow Run RO-Crates from Galaxy
RO-Crate in Python
Best practices for workflows in GitHub repositories
Submitting workflows to LifeMonitor

FAIR Pointers

This series of lessons will tackle FAIR from the perspective of the 15 FAIR Principles published in 2016. You will learn about: FAIR and its origins The FAIR Principles and its basic characteristics.

Lesson Slides Hands-on Recordings Input dataset Workflows
FAIR and its Origins
Metadata
Data Registration
Access
Persistent Identifiers

DataPLANT ARCs

This set of tutorials will introduce you to DataPLANT ARCs, and all the relevant tools to create your own ARCs

Lesson Slides Hands-on Recordings Input dataset Workflows
DataPLANT ARCs

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
An earth-system RO-Crate
Data management in Medicinal Chemistry

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoSimone Leo avatar Simone Leoorcid logoLuca Pireddu avatar Luca Piredduorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoPaul De Geest avatar Paul De Geestorcid logoKatarzyna Kamieniecka avatar Katarzyna Kamienieckaorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowicz

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Contributors

This material was contributed to by:

Marie Josse avatar Marie JosseLaura Cooper avatar Laura Cooperorcid logoSabrina Zander avatar Sabrina Zanderorcid logoJulia Jakiela avatar Julia Jakielaorcid logoSimone Leo avatar Simone Leoorcid logoPeter Sefton avatar Peter Seftonorcid logoKrzysztof Poterlowicz avatar Krzysztof Poterlowiczorcid logoBjörn Grüning avatar Björn Grüningorcid logoMarco Enrico Piras avatar Marco Enrico Pirasorcid logoKevin Frey avatar Kevin FreySonal Henson avatar Sonal Hensonorcid logoPhilippe Rocca-Serra avatar Philippe Rocca-Serraorcid logoTeresa Müller avatar Teresa Müllerorcid logoLeonid Kostrykin avatar Leonid KostrykinKorneel Hens avatar Korneel Hensorcid logoHelena Rasche avatar Helena Rascheorcid logoMartin Kuhl avatar Martin Kuhlorcid logoSaskia Lawson-Tovey avatar Saskia Lawson-Toveyorcid logoKatarzyna Kamieniecka avatar Katarzyna KamienieckaGareth Price avatar Gareth Priceorcid logoMunazah Andrabi avatar Munazah Andrabiorcid logoStian Soiland-Reyes avatar Stian Soiland-Reyesorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoEmily Angiolini avatar Emily Angioliniorcid logoCristina Martins Rodrigues avatar Cristina Martins Rodriguesorcid logoTristan Reynolds avatar Tristan Reynoldsorcid logoGabriela Lopez-Gonzalez avatar Gabriela Lopez-GonzalezKellie Snow avatar Kellie SnowLaura Cooper avatar Laura Cooperorcid logoSara Morsy avatar Sara Morsyorcid logoBranka Franicevic avatar Branka FranicevicDavid López avatar David LópezSandra Ng avatar Sandra NgStella Eggels avatar Stella Eggelsorcid logoXenia Perez Sitja avatar Xenia Perez Sitjaorcid logoKevin Rue-Albrecht avatar Kevin Rue-Albrechtorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoNick Juty avatar Nick Jutyorcid logoKhaled Jum'ah avatar Khaled Jum'ahorcid logoBruno P. Kinoshita avatar Bruno P. Kinoshitaorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoMartin Čech avatar Martin Čechorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-Solanoorcid logoDominik Brilhaus avatar Dominik Brilhausorcid logoLuca Pireddu avatar Luca Piredduorcid logoAndrew Mason avatar Andrew MasonTim Beck avatar Tim Beckorcid logoArmin Dadras avatar Armin Dadrasorcid logoEli Chadwick avatar Eli Chadwickorcid logoPaul De Geest avatar Paul De Geestorcid logoWendi Bacon avatar Wendi Baconorcid logoRobert Andrews avatar Robert Andrews

Funding

These individuals or organisations provided funding support for the development of this resource