Development in Galaxy

Galaxy is an open-source project. Everyone can contribute to its development with core Galaxy development, integration of softwares in Galaxy environment, …

For any question or discussions related to this topic, or to connect with others in the community, please visit the community chat:

  Community Matrix Chat

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides () and tutorial () buttons below.

Core

These are the core, foundational topics for Galaxy development.

Lesson Slides Hands-on Recordings
Contributing a New Feature to Galaxy Core
Debugging Galaxy
Galaxy Code Architecture
Writing Automated Tests for Galaxy

API

Interacting with the Galaxy API

Lesson Slides Hands-on Recordings
Contributing to BioBlend as a developer
Scripting Galaxy using the API and BioBlend

Dependencies

These topics include information on how dependencies work in Galaxy and how to construct them.

Lesson Slides Hands-on Recordings
Prerequisites for building software/conda packages
Tool Dependencies and Conda
Tool Dependencies and Containers

Tool Development

Here you can learn everything about tool development in the Galaxy Ecosystem

Lesson Slides Hands-on Recordings
Adding and updating best practice metadata for Galaxy tools using the bio.tools registry
Creating Galaxy tools from Conda Through Deployment
Galaxy Interactive Tools
Tool Shed: sharing Galaxy tools
Tool development and integration into Galaxy
ToolFactory: Generating Tools From More Complex Scripts
ToolFactory: Generating Tools From Simple Scripts

Viz

Visualizations in Galaxy give you the ability to implement Javascript apps into Galaxy to analyse and visualise data.

Lesson Slides Hands-on Recordings
Generic plugins
JavaScript plugins

Advanced Features

These are more advanced features of Galaxy which you might want to develop for as they greatly expand the abilities of Galaxy.

Lesson Slides Hands-on Recordings
Data source integration
Galaxy Interactive Tours
Galaxy Webhooks

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

Follow topic updates with our RSS Feed

Community Resources

Community Home Maintainer Home

Editorial Board

This material is reviewed by our Editorial Board:

Gildas Le Corguillé avatar Gildas Le Corguilléorcid logoBérénice Batut avatar Bérénice Batutorcid logoHelena Rasche avatar Helena Rasche

Contributors

This material was contributed to by:

Marie Josse avatar Marie JosseCyril Monjeaud avatar Cyril MonjeaudDannon Baker avatar Dannon BakerLoraine Guéguen avatar Loraine Guéguenorcid logoJohn Chilton avatar John Chiltonorcid logoJohan Gustafsson avatar Johan GustafssonLain Pavot avatar Lain Pavotorcid logoBjörn Grüning avatar Björn Grüningorcid logoWendi Bacon avatar Wendi BaconAssunta DeSanto avatar Assunta DeSantoYouri Hoogstrate avatar Youri HoogstrateMatthias Bernt avatar Matthias BerntGildas Le Corguillé avatar Gildas Le CorguilléDave B. avatar Dave B.orcid logoPaul Zierep avatar Paul ZierepSimon Bray avatar Simon BrayHervé Ménager avatar Hervé MénagerClare Sloggett avatar Clare SloggettEstelle Ancelet avatar Estelle Anceletorcid logoYvan Le Bras avatar Yvan Le Brasorcid logoHelena Rasche avatar Helena Rascheorcid logoBérénice Batut avatar Bérénice BatutErik Schill avatar Erik Schillorcid logoJohn Davis avatar John DavisStéphanie Legras avatar Stéphanie Legrasorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoSaskia Hiltemann avatar Saskia Hiltemannorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoGianmauro Cuccuru avatar Gianmauro Cuccuruorcid logoCameron Hyde avatar Cameron Hydeorcid logoNicola Soranzo avatar Nicola SoranzoAysam Guerler avatar Aysam Guerlerorcid logoNate Coraor avatar Nate CoraorNitesh Turaga avatar Nitesh Turagaorcid logoClemens Blank avatar Clemens BlankRoss Lazarus avatar Ross Lazarusorcid logoMartin Čech avatar Martin Čech

Funding

These individuals or organisations provided funding support for the development of this resource