Introduction to Galaxy Analyses

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Material

You can view the tutorial materials in different languages by clicking the dropdown icon next to the slides (slides) and tutorial (tutorial) buttons below.

First Time Using Galaxy

A quick look at using Galaxy

Lesson Slides Hands-on Recordings Input dataset Workflows
Introduction to Galaxy
A short introduction to Galaxy

Your First Analysis

These are the core, foundational topics for learning how to use Galaxy.

Lesson Slides Hands-on Recordings Input dataset Workflows
Galaxy Basics for everyone
Galaxy Basics for genomics
Introduction to Digital Humanities in Galaxy
Introduction to Galaxy as an RDM platform

Go a bit further

Explore the Galaxy a bit further after you've finished the basics.

Lesson Slides Hands-on Recordings Input dataset Workflows
Data Manipulation Olympics
From peaks to genes
How to reproduce published Galaxy analyses
Introduction to Genomics and Galaxy
NGS data logistics
Options for using Galaxy

Other

Assorted Tutorials

Lesson Slides Hands-on Recordings Input dataset Workflows
Best Practices for Citing Galaxy
Introduction to the Dataverse Integration in Galaxy

Learning Pathways

Or have a look at one of our learning pathways involving this topic. Learning pathways are sets of tutorials curated for you by community experts to form a coherent set of lessons around a topic, building up knowledge as you go. We always recommend to follow the tutorials in the order they are listed in the pathway.

Frequently Asked Questions

Common questions regarding this topic have been collected on a dedicated FAQ page . Common questions related to specific tutorials can be accessed from the tutorials themselves.

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Community Resources

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Editorial Board

This material is reviewed by our Editorial Board:

orcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoDelphine Lariviere avatar Delphine Lariviereorcid logoTeresa Müller avatar Teresa Müller

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Contributors

This material was contributed to by:

orcid logoMartin Čech avatar Martin Čechorcid logoCristóbal Gallardo avatar Cristóbal GallardoGildas Le Corguillé avatar Gildas Le Corguilléorcid logoAnthony Bretaudeau avatar Anthony Bretaudeauorcid logoBert Droesbeke avatar Bert Droesbekeorcid logoYvan Le Bras avatar Yvan Le BrasChristopher Barnett avatar Christopher Barnettorcid logoMorgan Howells avatar Morgan Howellsorcid logoSaskia Hiltemann avatar Saskia HiltemannDilmurat Yusuf avatar Dilmurat YusufAndrea Bagnacani avatar Andrea Bagnacaniorcid logoWendi Bacon avatar Wendi Baconorcid logoDeepti Varshney avatar Deepti Varshneyorcid logoHans-Rudolf Hotz avatar Hans-Rudolf Hotzorcid logoAhmed Hamid Awan avatar Ahmed Hamid Awanorcid logoPavankumar Videm avatar Pavankumar VidemDonny Vrins avatar Donny Vrinsorcid logoTeresa Müller avatar Teresa Müllerorcid logoMelanie Föll avatar Melanie FöllAlaa Elghamry avatar Alaa Elghamryorcid logoClemens Blank avatar Clemens Blankorcid logoJohn Davis avatar John DavisDavid López avatar David LópezScott Cain avatar Scott Cainorcid logoAnne Fouilloux avatar Anne FouillouxAnton Nekrutenko avatar Anton NekrutenkoJoachim Wolff avatar Joachim Wolfforcid logoPhil Reed avatar Phil Reedorcid logoPeter van Heusden avatar Peter van Heusdenorcid logoJennifer Hillman-Jackson avatar Jennifer Hillman-Jacksonorcid logoNicola Soranzo avatar Nicola Soranzoorcid logoNate Coraor avatar Nate Coraororcid logoMarisa Loach avatar Marisa LoachAnne Pajon avatar Anne PajonGoodnews Sandy avatar Goodnews Sandyorcid logoDaniel Blankenberg avatar Daniel BlankenbergSebastian Schaaf avatar Sebastian Schaaforcid logoMarius van den Beek avatar Marius van den Beekorcid logoAnna Syme avatar Anna SymeYongbin Li avatar Yongbin Liorcid logoAlex Ostrovsky avatar Alex Ostrovskyorcid logoDaniela Schneider avatar Daniela Schneiderorcid logoRenato Alves avatar Renato Alvesorcid logoAnup Kumar avatar Anup Kumarorcid logoMaria Doyle avatar Maria DoyleNiall Beard avatar Niall Beardorcid logoLucille Delisle avatar Lucille Delisleorcid logoTristan Reynolds avatar Tristan ReynoldsOlha Nahorna avatar Olha NahornaCyril Monjeaud avatar Cyril MonjeaudGareth Price avatar Gareth PriceMichele Maroni avatar Michele Maroniorcid logoRand Zoabi avatar Rand Zoabiorcid logoBjörn Grüning avatar Björn Grüningorcid logoBérénice Batut avatar Bérénice BatutMirela Minkova avatar Mirela Minkovaorcid logoWolfgang Maier avatar Wolfgang Maierorcid logoArmin Dadras avatar Armin Dadrasorcid logoDave Clements avatar Dave Clementsorcid logoBeatriz Serrano-Solano avatar Beatriz Serrano-SolanoMehmet Tekman avatar Mehmet Tekmanorcid logoMatthias Bernt avatar Matthias Berntorcid logoFlorian Heyl avatar Florian HeylMélanie Pétéra avatar Mélanie Pétéraorcid logoNadia Goué avatar Nadia GouéSarah Peter avatar Sarah PeterWilliam Durand avatar William Durandorcid logoHelena Rasche avatar Helena Rasche

Funding

These individuals or organisations provided funding support for the development of this resource